Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PMPCBO75439 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMPCBO75439 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PMPCBO75439 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
PMPCBO75439 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PMPCBO75439 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.33■□□□□ 0.37
PMPCBO75439 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMPCBO75439 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.33■□□□□ 0.37
PMPCBO75439 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMPCBO75439 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PMPCBO75439 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.33■□□□□ 0.37
PMPCBO75439 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PMPCBO75439 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PMPCBO75439 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.33■□□□□ 0.36
PMPCBO75439 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.33■□□□□ 0.36
PMPCBO75439 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.33■□□□□ 0.36
PMPCBO75439 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.33■□□□□ 0.36
PMPCBO75439 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.33■□□□□ 0.36
PMPCBO75439 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.33■□□□□ 0.36
PMPCBO75439 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.33■□□□□ 0.36
PMPCBO75439 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.33■□□□□ 0.36
PMPCBO75439 OR7E14P-202ENST00000530490 1290 ntBASIC17.33■□□□□ 0.36
PMPCBO75439 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.33■□□□□ 0.36
PMPCBO75439 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
PMPCBO75439 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 AL031008.1-201ENST00000619963 541 ntBASIC17.33■□□□□ 0.36
PMPCBO75439 AC004706.3-202ENST00000621574 984 ntBASIC17.33■□□□□ 0.36
PMPCBO75439 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PMPCBO75439 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.33■□□□□ 0.36
PMPCBO75439 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMPCBO75439 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PMPCBO75439 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 AC243591.1-201ENST00000452967 1364 ntBASIC17.32■□□□□ 0.36
PMPCBO75439 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PMPCBO75439 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 LAGE3P1-201ENST00000425356 484 ntBASIC17.32■□□□□ 0.36
PMPCBO75439 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.32■□□□□ 0.36
PMPCBO75439 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.32■□□□□ 0.36
PMPCBO75439 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.32■□□□□ 0.36
PMPCBO75439 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.32■□□□□ 0.36
PMPCBO75439 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.32■□□□□ 0.36
PMPCBO75439 AC107918.4-202ENST00000641623 219 ntBASIC17.32■□□□□ 0.36
PMPCBO75439 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 AC006504.4-201ENST00000592118 1568 ntBASIC17.32■□□□□ 0.36
PMPCBO75439 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMPCBO75439 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PMPCBO75439 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PMPCBO75439 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.31■□□□□ 0.36
PMPCBO75439 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.31■□□□□ 0.36
PMPCBO75439 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.31■□□□□ 0.36
PMPCBO75439 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 ELK2BP-201ENST00000415014 1224 ntBASIC17.31■□□□□ 0.36
PMPCBO75439 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PMPCBO75439 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms