Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 AL021920.2-201ENST00000624828 1351 ntBASIC16.34■□□□□ 0.21
PRICKLE3O43900 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PRICKLE3O43900 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.34■□□□□ 0.21
PRICKLE3O43900 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRICKLE3O43900 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRICKLE3O43900 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PRICKLE3O43900 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.33■□□□□ 0.21
PRICKLE3O43900 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
PRICKLE3O43900 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.33■□□□□ 0.21
PRICKLE3O43900 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PRICKLE3O43900 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PRICKLE3O43900 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 TUBB8P12-201ENST00000308911 1335 ntBASIC16.32■□□□□ 0.2
PRICKLE3O43900 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.32■□□□□ 0.2
PRICKLE3O43900 TUBB7P-202ENST00000428444 1305 ntBASIC16.32■□□□□ 0.2
PRICKLE3O43900 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 RNA5SP416-201ENST00000516838 111 ntBASIC16.32■□□□□ 0.2
PRICKLE3O43900 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 TUBB8P7-204ENST00000567960 1332 ntBASIC16.32■□□□□ 0.2
PRICKLE3O43900 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PRICKLE3O43900 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PRICKLE3O43900 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms