Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
KCNQ3O43525 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC21.72■■□□□ 1.07
KCNQ3O43525 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
KCNQ3O43525 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
KCNQ3O43525 AC092068.3-201ENST00000587894 2016 ntBASIC21.72■■□□□ 1.07
KCNQ3O43525 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
KCNQ3O43525 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC21.71■■□□□ 1.07
KCNQ3O43525 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.71■■□□□ 1.07
KCNQ3O43525 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 FAM8A3P-201ENST00000427218 844 ntBASIC21.71■■□□□ 1.07
KCNQ3O43525 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.71■■□□□ 1.07
KCNQ3O43525 SLC25A39P2-201ENST00000537614 270 ntBASIC21.71■■□□□ 1.07
KCNQ3O43525 TSFM-210ENST00000550559 897 ntTSL 5 BASIC21.71■■□□□ 1.07
KCNQ3O43525 MIR3197-201ENST00000582241 73 ntBASIC21.71■■□□□ 1.07
KCNQ3O43525 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.71■■□□□ 1.07
KCNQ3O43525 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
KCNQ3O43525 AC108860.2-201ENST00000562760 2183 ntBASIC21.71■■□□□ 1.07
KCNQ3O43525 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KCNQ3O43525 WASH6P-202ENST00000359512 1437 ntBASIC21.71■■□□□ 1.07
KCNQ3O43525 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
KCNQ3O43525 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.07
KCNQ3O43525 UXT-AS1-201ENST00000590504 1525 ntBASIC21.7■■□□□ 1.07
KCNQ3O43525 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNQ3O43525 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
KCNQ3O43525 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.7■■□□□ 1.06
KCNQ3O43525 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 SPDYE14P-201ENST00000442619 822 ntBASIC21.7■■□□□ 1.06
KCNQ3O43525 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.7■■□□□ 1.06
KCNQ3O43525 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.7■■□□□ 1.06
KCNQ3O43525 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNQ3O43525 AC026150.2-201ENST00000564693 1156 ntBASIC21.7■■□□□ 1.06
KCNQ3O43525 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.7■■□□□ 1.06
KCNQ3O43525 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.7■■□□□ 1.06
KCNQ3O43525 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 AC084121.4-201ENST00000641598 221 ntBASIC21.7■■□□□ 1.06
KCNQ3O43525 AF228730.8-201ENST00000642140 221 ntBASIC21.7■■□□□ 1.06
KCNQ3O43525 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.7■■□□□ 1.06
KCNQ3O43525 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
KCNQ3O43525 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.7■■□□□ 1.06
KCNQ3O43525 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KCNQ3O43525 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
KCNQ3O43525 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.69■■□□□ 1.06
KCNQ3O43525 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.69■■□□□ 1.06
KCNQ3O43525 AC051619.7-201ENST00000568314 623 ntBASIC21.69■■□□□ 1.06
KCNQ3O43525 AC015911.4-201ENST00000588022 1070 ntBASIC21.69■■□□□ 1.06
KCNQ3O43525 AP001059.3-201ENST00000619053 235 ntBASIC21.69■■□□□ 1.06
KCNQ3O43525 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC21.69■■□□□ 1.06
KCNQ3O43525 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 AL671710.1-201ENST00000610245 2349 ntBASIC21.69■■□□□ 1.06
KCNQ3O43525 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 AC008677.1-201ENST00000519230 1561 ntBASIC21.69■■□□□ 1.06
KCNQ3O43525 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC21.69■■□□□ 1.06
KCNQ3O43525 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
KCNQ3O43525 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KCNQ3O43525 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KCNQ3O43525 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms