Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF3O43395 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.58■□□□□ 0.72
PRPF3O43395 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF3O43395 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.58■□□□□ 0.72
PRPF3O43395 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF3O43395 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPF3O43395 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PRPF3O43395 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.57■□□□□ 0.72
PRPF3O43395 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 CRYGEP-201ENST00000412192 528 ntBASIC19.57■□□□□ 0.72
PRPF3O43395 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.57■□□□□ 0.72
PRPF3O43395 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 FAM185BP-201ENST00000443595 716 ntBASIC19.57■□□□□ 0.72
PRPF3O43395 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 HCG4B-203ENST00000450128 991 ntBASIC19.57■□□□□ 0.72
PRPF3O43395 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 MIR4492-201ENST00000581627 80 ntBASIC19.57■□□□□ 0.72
PRPF3O43395 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRPF3O43395 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRPF3O43395 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.57■□□□□ 0.72
PRPF3O43395 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 AC138932.1-201ENST00000534164 6830 ntBASIC19.57■□□□□ 0.72
PRPF3O43395 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRPF3O43395 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRPF3O43395 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPF3O43395 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 AGGF1P2-201ENST00000426656 2106 ntBASIC19.57■□□□□ 0.72
PRPF3O43395 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRPF3O43395 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPF3O43395 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.57■□□□□ 0.72
PRPF3O43395 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRPF3O43395 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRPF3O43395 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRPF3O43395 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPF3O43395 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRPF3O43395 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPF3O43395 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRPF3O43395 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRPF3O43395 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPF3O43395 IGLL3P-201ENST00000412472 434 ntBASIC19.56■□□□□ 0.72
PRPF3O43395 PMS2P1-201ENST00000431037 1228 ntBASIC19.56■□□□□ 0.72
PRPF3O43395 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.56■□□□□ 0.72
PRPF3O43395 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPF3O43395 SLC25A1P1-201ENST00000528351 927 ntBASIC19.56■□□□□ 0.72
PRPF3O43395 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.56■□□□□ 0.72
PRPF3O43395 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPF3O43395 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.56■□□□□ 0.72
PRPF3O43395 AC120114.3-201ENST00000611923 658 ntBASIC19.56■□□□□ 0.72
PRPF3O43395 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.56■□□□□ 0.72
PRPF3O43395 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.56■□□□□ 0.72
PRPF3O43395 NKILA-202ENST00000614771 2598 ntBASIC19.56■□□□□ 0.72
PRPF3O43395 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 AC009053.2-201ENST00000563701 2365 ntBASIC19.56■□□□□ 0.72
PRPF3O43395 AL391256.1-201ENST00000443260 1855 ntBASIC19.56■□□□□ 0.72
PRPF3O43395 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRPF3O43395 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.56■□□□□ 0.72
PRPF3O43395 SLC22A20-204ENST00000530038 1673 ntBASIC19.56■□□□□ 0.72
PRPF3O43395 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF3O43395 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF3O43395 AL353732.1-201ENST00000569618 1459 ntBASIC19.55■□□□□ 0.72
PRPF3O43395 AC006277.1-201ENST00000624348 1610 ntBASIC19.55■□□□□ 0.72
PRPF3O43395 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF3O43395 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.55■□□□□ 0.72
PRPF3O43395 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF3O43395 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF3O43395 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRPF3O43395 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms