Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GSC2O15499 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GSC2O15499 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
GSC2O15499 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
GSC2O15499 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
GSC2O15499 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
GSC2O15499 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GSC2O15499 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.43■□□□□ 0.22
GSC2O15499 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.43■□□□□ 0.22
GSC2O15499 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
GSC2O15499 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GSC2O15499 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
GSC2O15499 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.43■□□□□ 0.22
GSC2O15499 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GSC2O15499 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
GSC2O15499 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.43■□□□□ 0.22
GSC2O15499 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.43■□□□□ 0.22
GSC2O15499 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GSC2O15499 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
GSC2O15499 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 AC024563.2-201ENST00000603282 481 ntBASIC16.42■□□□□ 0.22
GSC2O15499 AC006058.3-201ENST00000606217 1069 ntBASIC16.42■□□□□ 0.22
GSC2O15499 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 AC073648.6-201ENST00000641589 218 ntBASIC16.42■□□□□ 0.22
GSC2O15499 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.42■□□□□ 0.22
GSC2O15499 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GSC2O15499 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.42■□□□□ 0.22
GSC2O15499 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.42■□□□□ 0.22
GSC2O15499 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GSC2O15499 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.41■□□□□ 0.22
GSC2O15499 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.41■□□□□ 0.22
GSC2O15499 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
GSC2O15499 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.41■□□□□ 0.22
GSC2O15499 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.41■□□□□ 0.22
GSC2O15499 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
GSC2O15499 C1QBPP2-201ENST00000528754 825 ntBASIC16.41■□□□□ 0.22
GSC2O15499 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.41■□□□□ 0.22
GSC2O15499 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.41■□□□□ 0.22
GSC2O15499 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 AL157888.1-201ENST00000631930 593 ntBASIC16.41■□□□□ 0.22
GSC2O15499 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.41■□□□□ 0.22
GSC2O15499 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
GSC2O15499 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
GSC2O15499 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms