Protein–RNA interactions for Protein: O00463

TRAF5, TNF receptor-associated factor 5, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5O00463 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAF5O00463 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAF5O00463 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.28■□□□□ 0.84
TRAF5O00463 SPTLC1P1-201ENST00000447199 261 ntBASIC20.28■□□□□ 0.84
TRAF5O00463 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAF5O00463 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAF5O00463 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAF5O00463 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAF5O00463 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAF5O00463 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAF5O00463 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRAF5O00463 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.28■□□□□ 0.84
TRAF5O00463 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.28■□□□□ 0.84
TRAF5O00463 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF5O00463 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.28■□□□□ 0.84
TRAF5O00463 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAF5O00463 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRAF5O00463 AL135999.2-201ENST00000622438 1686 ntBASIC20.28■□□□□ 0.84
TRAF5O00463 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
TRAF5O00463 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRAF5O00463 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRAF5O00463 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAF5O00463 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRAF5O00463 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAF5O00463 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
TRAF5O00463 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAF5O00463 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.27■□□□□ 0.84
TRAF5O00463 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRAF5O00463 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.27■□□□□ 0.84
TRAF5O00463 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.27■□□□□ 0.84
TRAF5O00463 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.27■□□□□ 0.84
TRAF5O00463 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TRAF5O00463 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAF5O00463 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAF5O00463 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAF5O00463 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF5O00463 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF5O00463 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF5O00463 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF5O00463 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF5O00463 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRAF5O00463 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAF5O00463 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
TRAF5O00463 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAF5O00463 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAF5O00463 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRAF5O00463 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAF5O00463 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRAF5O00463 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC20.26■□□□□ 0.83
TRAF5O00463 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAF5O00463 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAF5O00463 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAF5O00463 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAF5O00463 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAF5O00463 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.26■□□□□ 0.83
TRAF5O00463 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
TRAF5O00463 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRAF5O00463 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAF5O00463 AC093677.2-201ENST00000600169 1863 ntBASIC20.26■□□□□ 0.83
TRAF5O00463 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAF5O00463 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF5O00463 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAF5O00463 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF5O00463 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRAF5O00463 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAF5O00463 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRAF5O00463 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF5O00463 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF5O00463 NOC2LP1-202ENST00000452600 2235 ntBASIC20.25■□□□□ 0.83
TRAF5O00463 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF5O00463 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF5O00463 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF5O00463 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms