Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
O00370 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
O00370 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
O00370 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.2■□□□□ 0.5
O00370 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.2■□□□□ 0.5
O00370 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
O00370 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.19■□□□□ 0.5
O00370 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.19■□□□□ 0.5
O00370 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 FRMD8P1-201ENST00000440433 1524 ntBASIC18.19■□□□□ 0.5
O00370 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.19■□□□□ 0.5
O00370 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.19■□□□□ 0.5
O00370 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
O00370 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.19■□□□□ 0.5
O00370 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.19■□□□□ 0.5
O00370 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.19■□□□□ 0.5
O00370 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.19■□□□□ 0.5
O00370 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.19■□□□□ 0.5
O00370 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.19■□□□□ 0.5
O00370 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.19■□□□□ 0.5
O00370 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.19■□□□□ 0.5
O00370 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
O00370 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.19■□□□□ 0.5
O00370 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
O00370 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.19■□□□□ 0.5
O00370 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
O00370 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.19■□□□□ 0.5
O00370 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
O00370 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.19■□□□□ 0.5
O00370 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
O00370 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 AP002414.1-201ENST00000391405 1147 ntBASIC18.18■□□□□ 0.5
O00370 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 AC026396.1-201ENST00000419388 421 ntBASIC18.18■□□□□ 0.5
O00370 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.18■□□□□ 0.5
O00370 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 AC124947.2-201ENST00000547118 1133 ntBASIC18.18■□□□□ 0.5
O00370 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
O00370 TERC-201ENST00000602385 541 ntBASIC18.18■□□□□ 0.5
O00370 AL356488.2-201ENST00000602755 427 ntBASIC18.18■□□□□ 0.5
O00370 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
O00370 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
O00370 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
O00370 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
O00370 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 AC005915.1-201ENST00000624912 2018 ntBASIC18.18■□□□□ 0.5
O00370 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
O00370 AC046158.3-201ENST00000624947 2558 ntBASIC18.18■□□□□ 0.5
O00370 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.18■□□□□ 0.5
O00370 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
O00370 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.17■□□□□ 0.5
O00370 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
O00370 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
O00370 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms