Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC28A1O00337 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC28A1O00337 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SLC28A1O00337 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC28A1O00337 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC28A1O00337 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC28A1O00337 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 AL021920.2-201ENST00000624828 1351 ntBASIC16.44■□□□□ 0.22
SLC28A1O00337 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SLC28A1O00337 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 ABCD1P5-201ENST00000445663 754 ntBASIC16.44■□□□□ 0.22
SLC28A1O00337 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.44■□□□□ 0.22
SLC28A1O00337 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 AC012615.1-201ENST00000565797 1299 ntBASIC16.44■□□□□ 0.22
SLC28A1O00337 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC28A1O00337 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC28A1O00337 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
SLC28A1O00337 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SLC28A1O00337 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SLC28A1O00337 AP000550.4-202ENST00000639755 178 ntBASIC16.44■□□□□ 0.22
SLC28A1O00337 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC28A1O00337 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC28A1O00337 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC28A1O00337 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC28A1O00337 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.43■□□□□ 0.22
SLC28A1O00337 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 FAM210CP-201ENST00000445714 574 ntBASIC16.43■□□□□ 0.22
SLC28A1O00337 MIR3180-1-201ENST00000580374 94 ntBASIC16.43■□□□□ 0.22
SLC28A1O00337 MIR3180-3-201ENST00000584616 94 ntBASIC16.43■□□□□ 0.22
SLC28A1O00337 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC28A1O00337 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC28A1O00337 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SLC28A1O00337 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A1O00337 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SLC28A1O00337 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.43■□□□□ 0.22
SLC28A1O00337 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.43■□□□□ 0.22
SLC28A1O00337 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
SLC28A1O00337 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A1O00337 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.42■□□□□ 0.22
SLC28A1O00337 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A1O00337 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A1O00337 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.42■□□□□ 0.22
SLC28A1O00337 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SLC28A1O00337 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SLC28A1O00337 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms