Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TLR4O00206 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.89■□□□□ 0.3
TLR4O00206 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.89■□□□□ 0.3
TLR4O00206 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TLR4O00206 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TLR4O00206 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.89■□□□□ 0.3
TLR4O00206 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR4O00206 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TLR4O00206 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR4O00206 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.89■□□□□ 0.29
TLR4O00206 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.89■□□□□ 0.29
TLR4O00206 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.89■□□□□ 0.29
TLR4O00206 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.89■□□□□ 0.29
TLR4O00206 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.89■□□□□ 0.29
TLR4O00206 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.89■□□□□ 0.29
TLR4O00206 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.89■□□□□ 0.29
TLR4O00206 AC093028.1-201ENST00000622998 982 ntBASIC16.89■□□□□ 0.29
TLR4O00206 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR4O00206 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
TLR4O00206 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR4O00206 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TLR4O00206 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR4O00206 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.89■□□□□ 0.29
TLR4O00206 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.89■□□□□ 0.29
TLR4O00206 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR4O00206 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TLR4O00206 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR4O00206 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.88■□□□□ 0.29
TLR4O00206 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.88■□□□□ 0.29
TLR4O00206 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR4O00206 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR4O00206 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 AL139400.1-201ENST00000366220 510 ntBASIC16.88■□□□□ 0.29
TLR4O00206 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.88■□□□□ 0.29
TLR4O00206 AC002056.1-201ENST00000395613 760 ntBASIC16.88■□□□□ 0.29
TLR4O00206 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.88■□□□□ 0.29
TLR4O00206 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR4O00206 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.88■□□□□ 0.29
TLR4O00206 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.88■□□□□ 0.29
TLR4O00206 AC004449.1-201ENST00000564240 433 ntBASIC16.88■□□□□ 0.29
TLR4O00206 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.88■□□□□ 0.29
TLR4O00206 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR4O00206 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR4O00206 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TLR4O00206 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.87■□□□□ 0.29
TLR4O00206 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.87■□□□□ 0.29
TLR4O00206 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TLR4O00206 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.87■□□□□ 0.29
TLR4O00206 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
TLR4O00206 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TLR4O00206 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.87■□□□□ 0.29
TLR4O00206 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.87■□□□□ 0.29
TLR4O00206 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TLR4O00206 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
TLR4O00206 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TLR4O00206 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.87■□□□□ 0.29
TLR4O00206 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
TLR4O00206 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.87■□□□□ 0.29
TLR4O00206 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TLR4O00206 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.87■□□□□ 0.29
TLR4O00206 PRORSD1P-202ENST00000563365 2154 ntBASIC16.87■□□□□ 0.29
TLR4O00206 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.86■□□□□ 0.29
TLR4O00206 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TLR4O00206 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms