Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.15■□□□□ 0.5
RCCD1A6NED2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RCCD1A6NED2 AL596257.1-201ENST00000641463 2694 ntBASIC18.15■□□□□ 0.5
RCCD1A6NED2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
RCCD1A6NED2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RCCD1A6NED2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
RCCD1A6NED2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 AC105917.1-201ENST00000506637 2539 ntBASIC18.14■□□□□ 0.49
RCCD1A6NED2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 INTS4P1-201ENST00000438455 1935 ntBASIC18.14■□□□□ 0.49
RCCD1A6NED2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 DUX4L26-201ENST00000489078 1255 ntBASIC18.14■□□□□ 0.49
RCCD1A6NED2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RCCD1A6NED2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.14■□□□□ 0.49
RCCD1A6NED2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 AP002490.2-201ENST00000524791 560 ntBASIC18.13■□□□□ 0.49
RCCD1A6NED2 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 NTF6B-201ENST00000591913 560 ntBASIC18.13■□□□□ 0.49
RCCD1A6NED2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 AC016734.2-201ENST00000624325 1377 ntBASIC18.13■□□□□ 0.49
RCCD1A6NED2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RCCD1A6NED2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.13■□□□□ 0.49
RCCD1A6NED2 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 LINC00895-201ENST00000629028 1637 ntBASIC18.12■□□□□ 0.49
RCCD1A6NED2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RCCD1A6NED2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.12■□□□□ 0.49
RCCD1A6NED2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms