Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 ACTG1P4-201ENST00000425123 1122 ntBASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 BNIP3P18-201ENST00000593976 575 ntBASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TCRBV9S1A1TA0A576 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 AL513523.2-202ENST00000427283 2040 ntBASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 TMPOP1-202ENST00000424642 1267 ntBASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 SIGLEC30P-201ENST00000455569 941 ntBASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 AL162727.3-201ENST00000635661 2787 ntBASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.18■□□□□ 0.34
TCRBV9S1A1TA0A576 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 RCN1P2-201ENST00000398357 915 ntBASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 DRAXINP1-201ENST00000437611 948 ntBASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 AC096582.2-201ENST00000510860 516 ntBASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 Z69720.1-201ENST00000601483 472 ntBASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TCRBV9S1A1TA0A576 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms