Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC002558.1-201ENST00000488906 803 ntBASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RNF103-CHMP3A0A140T963 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC097374.2-201ENST00000618617 1306 ntBASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 COX5BP2-201ENST00000392354 334 ntBASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 TMPOP1-202ENST00000424642 1267 ntBASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 TSPY22P-201ENST00000427496 604 ntBASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 AL592071.1-201ENST00000611956 408 ntBASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RNF103-CHMP3A0A140T963 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC068418.2-201ENST00000577309 3703 ntBASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 AC026691.1-201ENST00000602502 2017 ntBASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RNF103-CHMP3A0A140T963 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms