Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TRAV5A0A0B4J249 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 RNF126P1-202ENST00000569893 925 ntBASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 AL390719.2-201ENST00000606993 987 ntBASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 AC139887.4-201ENST00000607877 719 ntBASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 AC007950.2-201ENST00000615045 2347 ntBASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TRAV5A0A0B4J249 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 FRMD8P1-201ENST00000440433 1524 ntBASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 AL049757.1-201ENST00000616842 1596 ntBASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 AC145285.6-201ENST00000604632 637 ntBASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ALOX12P2-203ENST00000570921 1945 ntBASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 Z83836.1-201ENST00000624605 1642 ntBASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 AL513523.2-202ENST00000427283 2040 ntBASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 KRT8P10-201ENST00000450021 1447 ntBASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TRAV5A0A0B4J249 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.29□□□□□ -0.28
TRAV5A0A0B4J249 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms