Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AL732292.2-201ENST00000609649 430 ntBASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AL049757.1-201ENST00000616842 1596 ntBASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGB3Q9Y5G1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 FDX1P1-201ENST00000449115 551 ntBASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 FLJ38576-201ENST00000623820 2459 ntBASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGB3Q9Y5G1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 TP73-AS1-210ENST00000637775 1455 ntBASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGB3Q9Y5G1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms