Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 MRPL20P1-201ENST00000400819 433 ntBASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 SLC25A6P2-201ENST00000497974 877 ntBASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 OR7E47P-204ENST00000575924 449 ntBASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 MIR4751-201ENST00000578027 74 ntBASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGC4Q9Y5F7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 ZNF259P1-201ENST00000407656 1365 ntBASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGC4Q9Y5F7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGC4Q9Y5F7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 AC002310.6-201ENST00000624451 1377 ntBASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 AC124947.2-201ENST00000547118 1133 ntBASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGC4Q9Y5F7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms