Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 RBM17P3-201ENST00000417687 1192 ntBASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 FOSL1P1-201ENST00000511041 816 ntBASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 AL139011.1-202ENST00000642063 584 ntBASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL27Q9Y4X3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 NCF1C-201ENST00000438382 1427 ntBASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CCL27Q9Y4X3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 AC092364.2-201ENST00000596710 2692 ntBASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 PAWRP1-201ENST00000451083 565 ntBASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 AL732292.2-201ENST00000609649 430 ntBASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 AL139288.1-201ENST00000623748 933 ntBASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 ME2P1-201ENST00000426028 1970 ntBASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 SNX33P1-201ENST00000592116 1762 ntBASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCL27Q9Y4X3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.25■□□□□ 0.19
CCL27Q9Y4X3 AL139424.1-201ENST00000607572 797 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms