Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AC148477.5-201ENST00000625164 1645 ntBASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 MIR1224-201ENST00000408193 85 ntBASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 AC093458.2-201ENST00000623150 629 ntBASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 AP000867.4-201ENST00000641616 219 ntBASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 AL603756.1-201ENST00000606511 2163 ntBASIC16.7■□□□□ 0.26
RNF11Q9Y3C5 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 NUS1P2-201ENST00000417358 873 ntBASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 MIR5100-201ENST00000579544 119 ntBASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 AC026691.1-201ENST00000602502 2017 ntBASIC16.69■□□□□ 0.26
RNF11Q9Y3C5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF11Q9Y3C5 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms