Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 KRT18P1-202ENST00000452408 1331 ntBASIC16.06■□□□□ 0.16
IFT52Q9Y366 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT52Q9Y366 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 Z69720.1-201ENST00000601483 472 ntBASIC16.06■□□□□ 0.16
IFT52Q9Y366 AC116407.4-201ENST00000623319 1061 ntBASIC16.06■□□□□ 0.16
IFT52Q9Y366 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT52Q9Y366 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT52Q9Y366 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT52Q9Y366 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IFT52Q9Y366 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
IFT52Q9Y366 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IFT52Q9Y366 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 AC003669.1-201ENST00000334569 611 ntBASIC16.05■□□□□ 0.16
IFT52Q9Y366 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 SLC25A1P3-201ENST00000395415 828 ntBASIC16.05■□□□□ 0.16
IFT52Q9Y366 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 TSSC2-201ENST00000450217 709 ntBASIC16.05■□□□□ 0.16
IFT52Q9Y366 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 AL590326.2-201ENST00000625139 305 ntBASIC16.05■□□□□ 0.16
IFT52Q9Y366 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IFT52Q9Y366 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.05■□□□□ 0.16
IFT52Q9Y366 AC023824.1-201ENST00000562945 2975 ntBASIC16.05■□□□□ 0.16
IFT52Q9Y366 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 AC060834.1-201ENST00000443027 2032 ntBASIC16.04■□□□□ 0.16
IFT52Q9Y366 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 AC233702.3-201ENST00000578656 1387 ntBASIC16.04■□□□□ 0.16
IFT52Q9Y366 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 DRAXINP1-201ENST00000437611 948 ntBASIC16.04■□□□□ 0.16
IFT52Q9Y366 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IFT52Q9Y366 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
IFT52Q9Y366 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms