Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 AC027307.2-201ENST00000591252 911 ntBASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 AC084121.4-201ENST00000641598 221 ntBASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 AF228730.8-201ENST00000642140 221 ntBASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 AC016027.1-202ENST00000607927 1699 ntBASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HCFC1R1Q9NWW0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 AC087641.1-201ENST00000557561 1021 ntBASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 AC091167.2-201ENST00000579581 588 ntBASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 AC239800.4-201ENST00000603712 296 ntBASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 MIR6080-201ENST00000617359 66 ntBASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 AL390754.1-201ENST00000619088 582 ntBASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.6■□□□□ 0.41
HCFC1R1Q9NWW0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 IGHV3-42-201ENST00000520410 361 ntBASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 ALG1L8P-201ENST00000533887 760 ntBASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 AC140878.1-201ENST00000565277 250 ntBASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 AL138918.1-201ENST00000568306 659 ntBASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 AP000842.3-202ENST00000569238 1080 ntBASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HCFC1R1Q9NWW0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms