Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC093028.1-201ENST00000622998 982 ntBASIC17.67■□□□□ 0.42
HPS4Q9NQG7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.67■□□□□ 0.42
HPS4Q9NQG7 AC105339.1-204ENST00000636249 355 ntBASIC17.67■□□□□ 0.42
HPS4Q9NQG7 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.67■□□□□ 0.42
HPS4Q9NQG7 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.67■□□□□ 0.42
HPS4Q9NQG7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS4Q9NQG7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS4Q9NQG7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS4Q9NQG7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS4Q9NQG7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HPS4Q9NQG7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.66■□□□□ 0.42
HPS4Q9NQG7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 AL513480.1-201ENST00000451731 511 ntBASIC17.66■□□□□ 0.42
HPS4Q9NQG7 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HPS4Q9NQG7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 REXO1L3P-201ENST00000622202 1288 ntBASIC17.65■□□□□ 0.42
HPS4Q9NQG7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HPS4Q9NQG7 PRORSD1P-202ENST00000563365 2154 ntBASIC17.64■□□□□ 0.42
HPS4Q9NQG7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HPS4Q9NQG7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.64■□□□□ 0.42
HPS4Q9NQG7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.64■□□□□ 0.42
HPS4Q9NQG7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.64■□□□□ 0.42
HPS4Q9NQG7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.64■□□□□ 0.42
HPS4Q9NQG7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.64■□□□□ 0.41
HPS4Q9NQG7 AC022145.2-201ENST00000598203 171 ntBASIC17.64■□□□□ 0.41
HPS4Q9NQG7 AC004835.2-201ENST00000603762 682 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms