Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 TUBB7P-202ENST00000428444 1305 ntBASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 TUBB8P7-204ENST00000567960 1332 ntBASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NEUROD4Q9HD90 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 FDX1P1-201ENST00000449115 551 ntBASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 AC079776.2-201ENST00000641154 1609 ntBASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NEUROD4Q9HD90 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 KRT16P4-201ENST00000453883 522 ntBASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 MIR5100-201ENST00000579544 119 ntBASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NEUROD4Q9HD90 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms