Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 NKAPP1-205ENST00000585790 367 ntBASIC18.02■□□□□ 0.48
CD248Q9HCU0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.02■□□□□ 0.48
CD248Q9HCU0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CD248Q9HCU0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.02■□□□□ 0.47
CD248Q9HCU0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD248Q9HCU0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD248Q9HCU0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CD248Q9HCU0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
CD248Q9HCU0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CD248Q9HCU0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD248Q9HCU0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD248Q9HCU0 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
CD248Q9HCU0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD248Q9HCU0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CD248Q9HCU0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 FAM220CP-201ENST00000395253 831 ntBASIC18.01■□□□□ 0.47
CD248Q9HCU0 AC096633.1-201ENST00000422446 749 ntBASIC18.01■□□□□ 0.47
CD248Q9HCU0 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 AC034105.1-201ENST00000563488 319 ntBASIC18.01■□□□□ 0.47
CD248Q9HCU0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CD248Q9HCU0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD248Q9HCU0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 PMS2P7-201ENST00000506558 1336 ntBASIC18■□□□□ 0.47
CD248Q9HCU0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18■□□□□ 0.47
CD248Q9HCU0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18■□□□□ 0.47
CD248Q9HCU0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18■□□□□ 0.47
CD248Q9HCU0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18■□□□□ 0.47
CD248Q9HCU0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 PCDHB17P-201ENST00000539533 2393 ntBASIC18■□□□□ 0.47
CD248Q9HCU0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 LBH-204ENST00000406087 559 ntTSL 4 BASIC18■□□□□ 0.47
CD248Q9HCU0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18■□□□□ 0.47
CD248Q9HCU0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18■□□□□ 0.47
CD248Q9HCU0 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18■□□□□ 0.47
CD248Q9HCU0 AC008735.5-201ENST00000623544 497 ntBASIC18■□□□□ 0.47
CD248Q9HCU0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 ZNF259P1-201ENST00000407656 1365 ntBASIC18■□□□□ 0.47
CD248Q9HCU0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD248Q9HCU0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.99■□□□□ 0.47
CD248Q9HCU0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD248Q9HCU0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD248Q9HCU0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD248Q9HCU0 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD248Q9HCU0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.99■□□□□ 0.47
CD248Q9HCU0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CD248Q9HCU0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD248Q9HCU0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD248Q9HCU0 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.99■□□□□ 0.47
CD248Q9HCU0 AC132872.4-202ENST00000622924 2756 ntBASIC17.99■□□□□ 0.47
CD248Q9HCU0 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD248Q9HCU0 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.99■□□□□ 0.47
CD248Q9HCU0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD248Q9HCU0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms