Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MIR1199-201ENST00000621445 119 ntBASIC14.97□□□□□ -0.01
CDH20Q9HBT6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH20Q9HBT6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 AC093525.9-201ENST00000624961 1746 ntBASIC14.96□□□□□ -0.01
CDH20Q9HBT6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH20Q9HBT6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH20Q9HBT6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDH20Q9HBT6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH20Q9HBT6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CDH20Q9HBT6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH20Q9HBT6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 AL031284.1-201ENST00000419297 478 ntBASIC14.95□□□□□ -0.02
CDH20Q9HBT6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 AP001005.1-201ENST00000571755 1248 ntBASIC14.95□□□□□ -0.02
CDH20Q9HBT6 AL353135.1-201ENST00000606729 504 ntBASIC14.95□□□□□ -0.02
CDH20Q9HBT6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH20Q9HBT6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.94□□□□□ -0.02
CDH20Q9HBT6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH20Q9HBT6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms