Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 AL022342.1-201ENST00000400363 863 ntBASIC15.85■□□□□ 0.13
UBQLN3Q9H347 SIGLEC30P-201ENST00000455569 941 ntBASIC15.85■□□□□ 0.13
UBQLN3Q9H347 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 AC120114.3-201ENST00000611923 658 ntBASIC15.85■□□□□ 0.13
UBQLN3Q9H347 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 AL589182.2-201ENST00000619332 1049 ntBASIC15.85■□□□□ 0.13
UBQLN3Q9H347 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.85■□□□□ 0.13
UBQLN3Q9H347 AC116407.3-201ENST00000623905 1129 ntBASIC15.85■□□□□ 0.13
UBQLN3Q9H347 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
UBQLN3Q9H347 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 KRT18P27-201ENST00000427733 1299 ntBASIC15.84■□□□□ 0.13
UBQLN3Q9H347 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
UBQLN3Q9H347 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBQLN3Q9H347 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBQLN3Q9H347 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBQLN3Q9H347 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBQLN3Q9H347 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
UBQLN3Q9H347 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.83■□□□□ 0.13
UBQLN3Q9H347 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.83■□□□□ 0.13
UBQLN3Q9H347 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.83■□□□□ 0.12
UBQLN3Q9H347 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.83■□□□□ 0.12
UBQLN3Q9H347 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms