Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 AP001269.4-201ENST00000609611 512 ntBASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 PCDH8P1-201ENST00000428983 2773 ntBASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
UPF3BQ9BZI7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPF3BQ9BZI7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPF3BQ9BZI7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPF3BQ9BZI7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPF3BQ9BZI7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
UPF3BQ9BZI7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPF3BQ9BZI7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
UPF3BQ9BZI7 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
UPF3BQ9BZI7 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
UPF3BQ9BZI7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 FOSL1P1-201ENST00000511041 816 ntBASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 AL591684.3-201ENST00000605187 298 ntBASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 AL662844.4-201ENST00000606367 2838 ntBASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
UPF3BQ9BZI7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 SIGLEC16-201ENST00000599858 1437 ntBASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 AC132008.2-207ENST00000454517 770 ntBASIC20.37■□□□□ 0.85
UPF3BQ9BZI7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms