Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 KRT18P58-201ENST00000527480 1120 ntBASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 SLC25A1P1-201ENST00000528351 927 ntBASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM62Q9BVG3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 MED15P5-201ENST00000423150 992 ntBASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 HCG4B-203ENST00000450128 991 ntBASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 CXCL1P1-201ENST00000502804 216 ntBASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 DUX4L17-201ENST00000557360 1267 ntBASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 REXO1L3P-201ENST00000622202 1288 ntBASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM62Q9BVG3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 FAM185BP-201ENST00000443595 716 ntBASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 AC096734.2-201ENST00000562054 433 ntBASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 OR7E47P-204ENST00000575924 449 ntBASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 AC064836.3-201ENST00000607928 673 ntBASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM62Q9BVG3 AL353732.1-201ENST00000569618 1459 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms