Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCL13Q99616 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCL13Q99616 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCL13Q99616 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCL13Q99616 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.31□□□□□ -0.12
CCL13Q99616 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 AC098831.1-202ENST00000438821 336 ntBASIC14.31□□□□□ -0.12
CCL13Q99616 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL13Q99616 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.31□□□□□ -0.12
CCL13Q99616 AC117500.6-201ENST00000624871 588 ntBASIC14.31□□□□□ -0.12
CCL13Q99616 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL13Q99616 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CCL13Q99616 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL13Q99616 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCL13Q99616 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
CCL13Q99616 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL13Q99616 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL13Q99616 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL13Q99616 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL13Q99616 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL13Q99616 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL13Q99616 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL13Q99616 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 PGM5P2-202ENST00000637225 1043 ntBASIC14.3□□□□□ -0.12
CCL13Q99616 AL805961.1-202ENST00000641562 540 ntBASIC14.3□□□□□ -0.12
CCL13Q99616 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCL13Q99616 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL13Q99616 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL13Q99616 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms