Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LRRC58Q96CX6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 FAM220CP-201ENST00000395253 831 ntBASIC16.27■□□□□ 0.2
LRRC58Q96CX6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 GUSBP12-201ENST00000513727 720 ntBASIC16.27■□□□□ 0.2
LRRC58Q96CX6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 LINC01023-201ENST00000606054 436 ntBASIC16.27■□□□□ 0.2
LRRC58Q96CX6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LRRC58Q96CX6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.27■□□□□ 0.19
LRRC58Q96CX6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 KRT18P38-201ENST00000449496 1282 ntBASIC16.26■□□□□ 0.19
LRRC58Q96CX6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 AL353801.3-201ENST00000609898 542 ntBASIC16.26■□□□□ 0.19
LRRC58Q96CX6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.26■□□□□ 0.19
LRRC58Q96CX6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC58Q96CX6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC58Q96CX6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms