Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 AL138847.2-201ENST00000624477 1819 ntBASIC10.56□□□□□ -0.72
SVIPQ8NHG7 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 AC006333.2-201ENST00000607957 2099 ntBASIC10.56□□□□□ -0.72
SVIPQ8NHG7 KLK2-201ENST00000325321 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 SPDYE16-202ENST00000632547 3434 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 AL023806.1-201ENST00000603994 1649 ntBASIC10.56□□□□□ -0.72
SVIPQ8NHG7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 TP53-222ENST00000617185 2724 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 OR2I1P-210ENST00000642037 4691 ntBASIC10.56□□□□□ -0.72
SVIPQ8NHG7 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 CASP8-201ENST00000264274 2540 ntTSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 KLK10-203ENST00000391805 3006 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 PER1-211ENST00000581082 4521 ntTSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 REXO1L11P-201ENST00000620964 1927 ntBASIC10.56□□□□□ -0.72
SVIPQ8NHG7 Z95114.3-201ENST00000624395 1921 ntBASIC10.56□□□□□ -0.72
SVIPQ8NHG7 DGKA-229ENST00000551156 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SVIPQ8NHG7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 LILRB2-203ENST00000391748 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 AP001107.1-201ENST00000501708 2792 ntTSL 2 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ODCP-201ENST00000459650 1639 ntBASIC10.55□□□□□ -0.72
SVIPQ8NHG7 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 BCO1-201ENST00000258168 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 AC244517.3-201ENST00000616254 1235 ntBASIC10.55□□□□□ -0.72
SVIPQ8NHG7 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 GBP1P1-201ENST00000394662 1740 ntBASIC10.55□□□□□ -0.72
SVIPQ8NHG7 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 ODF2-203ENST00000372807 2475 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC10.55□□□□□ -0.72
SVIPQ8NHG7 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SVIPQ8NHG7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms