Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ZNF248Q8NDW4 NOC2LP2-201ENST00000407594 1944 ntBASIC16.33■□□□□ 0.21
ZNF248Q8NDW4 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ZNF248Q8NDW4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.33■□□□□ 0.21
ZNF248Q8NDW4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 AC002056.1-201ENST00000395613 760 ntBASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 AL627223.1-201ENST00000416693 442 ntBASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 LINC00982-205ENST00000420957 435 ntBASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 DUX4L27-201ENST00000554796 1261 ntBASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 AC019129.2-201ENST00000609837 1235 ntBASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 AC093010.1-201ENST00000473625 1624 ntBASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
ZNF248Q8NDW4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 HLA-J-202ENST00000469281 1241 ntBASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 FAM86C2P-203ENST00000528684 1004 ntBASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 AC005225.4-201ENST00000557330 545 ntBASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 AC006116.8-202ENST00000587620 1550 ntBASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 AC026120.1-201ENST00000611536 926 ntBASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ZNF248Q8NDW4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms