Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 TSPY19P-201ENST00000418461 509 ntBASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 TSPY18P-201ENST00000441642 509 ntBASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 AL732292.2-201ENST00000609649 430 ntBASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 LINC00554-201ENST00000564841 3011 ntBASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EFCAB3Q8N7B9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 IGHGP-201ENST00000390555 1178 ntBASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 CT45A11P-201ENST00000448043 1134 ntBASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 GPR32P1-201ENST00000601788 811 ntBASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 AC133485.6-201ENST00000624045 688 ntBASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 AL031430.1-201ENST00000642067 1039 ntBASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EFCAB3Q8N7B9 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 REXO1L11P-201ENST00000620964 1927 ntBASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EFCAB3Q8N7B9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms