Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.34■□□□□ 0.37
PGBD3Q8N328 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.34■□□□□ 0.37
PGBD3Q8N328 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.34■□□□□ 0.37
PGBD3Q8N328 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.34■□□□□ 0.37
PGBD3Q8N328 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.34■□□□□ 0.37
PGBD3Q8N328 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.34■□□□□ 0.37
PGBD3Q8N328 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD3Q8N328 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PGBD3Q8N328 NFIC-211ENST00000641145 8399 ntBASIC17.34■□□□□ 0.37
PGBD3Q8N328 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.33■□□□□ 0.37
PGBD3Q8N328 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PGBD3Q8N328 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PGBD3Q8N328 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PGBD3Q8N328 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PGBD3Q8N328 KRT18P55-202ENST00000578578 1546 ntBASIC17.33■□□□□ 0.37
PGBD3Q8N328 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.33■□□□□ 0.36
PGBD3Q8N328 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.33■□□□□ 0.36
PGBD3Q8N328 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.33■□□□□ 0.36
PGBD3Q8N328 AC092902.6-201ENST00000641783 218 ntBASIC17.33■□□□□ 0.36
PGBD3Q8N328 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.33■□□□□ 0.36
PGBD3Q8N328 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD3Q8N328 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PGBD3Q8N328 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
PGBD3Q8N328 AL135999.2-201ENST00000622438 1686 ntBASIC17.32■□□□□ 0.36
PGBD3Q8N328 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 FAM8A3P-201ENST00000427218 844 ntBASIC17.32■□□□□ 0.36
PGBD3Q8N328 FAM185BP-201ENST00000443595 716 ntBASIC17.32■□□□□ 0.36
PGBD3Q8N328 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 AC112191.1-201ENST00000523689 701 ntBASIC17.32■□□□□ 0.36
PGBD3Q8N328 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PGBD3Q8N328 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD3Q8N328 AC006116.8-202ENST00000587620 1550 ntBASIC17.32■□□□□ 0.36
PGBD3Q8N328 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.31■□□□□ 0.36
PGBD3Q8N328 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD3Q8N328 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms