Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 RNA5SP415-201ENST00000517246 115 ntBASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 AC124947.2-201ENST00000547118 1133 ntBASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 AF228730.7-201ENST00000641842 219 ntBASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SCUBE3Q8IX30 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 RPL13AP23-201ENST00000480739 586 ntBASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 GGTLC5P-201ENST00000617623 998 ntBASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 AC004790.2-201ENST00000623588 572 ntBASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCUBE3Q8IX30 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 AC087163.2-201ENST00000457299 853 ntBASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 PCDHA12-202ENST00000613593 2588 ntBASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCUBE3Q8IX30 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
SCUBE3Q8IX30 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms