Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 HLA-J-201ENST00000462773 1622 ntBASIC17.25■□□□□ 0.35
PACS2Q86VP3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PACS2Q86VP3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.25■□□□□ 0.35
PACS2Q86VP3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.24■□□□□ 0.35
PACS2Q86VP3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.24■□□□□ 0.35
PACS2Q86VP3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.24■□□□□ 0.35
PACS2Q86VP3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PACS2Q86VP3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
PACS2Q86VP3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 AC073508.3-201ENST00000619697 1419 ntBASIC17.23■□□□□ 0.35
PACS2Q86VP3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.23■□□□□ 0.35
PACS2Q86VP3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PACS2Q86VP3 AC139749.1-202ENST00000617529 3139 ntBASIC17.23■□□□□ 0.35
PACS2Q86VP3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 AC022532.1-201ENST00000624563 1728 ntBASIC17.22■□□□□ 0.35
PACS2Q86VP3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.22■□□□□ 0.35
PACS2Q86VP3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms