Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 AP006294.1-201ENST00000415407 339 ntBASIC11.73□□□□□ -0.53
CSMD3Q7Z407 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 HLA-V-204ENST00000476601 1289 ntBASIC11.73□□□□□ -0.53
CSMD3Q7Z407 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.73□□□□□ -0.53
CSMD3Q7Z407 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC11.73□□□□□ -0.53
CSMD3Q7Z407 LYSMD4-203ENST00000378904 2122 ntBASIC11.72□□□□□ -0.53
CSMD3Q7Z407 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.72□□□□□ -0.53
CSMD3Q7Z407 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.72□□□□□ -0.53
CSMD3Q7Z407 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 MADD-208ENST00000405573 1823 ntTSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 RN7SL752P-201ENST00000463779 287 ntBASIC11.72□□□□□ -0.53
CSMD3Q7Z407 AC092552.1-201ENST00000547243 906 ntBASIC11.72□□□□□ -0.53
CSMD3Q7Z407 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CHCHD2P3-201ENST00000603038 451 ntBASIC11.72□□□□□ -0.53
CSMD3Q7Z407 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
CSMD3Q7Z407 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 USB1-203ENST00000539737 1212 ntTSL 2 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 CTBP2P3-201ENST00000585629 1255 ntBASIC11.71□□□□□ -0.53
CSMD3Q7Z407 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
CSMD3Q7Z407 AC073389.1-201ENST00000595595 795 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms