Protein–RNA interactions for Protein: Q5VV41

ARHGEF16, Rho guanine nucleotide exchange factor 16, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16Q5VV41 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 HMGA1P7-201ENST00000406908 502 ntBASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 AC027796.2-201ENST00000575326 344 ntBASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ARHGEF16Q5VV41 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 TOP3BP1-201ENST00000420768 1380 ntBASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 AC004835.2-201ENST00000603762 682 ntBASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 AL513210.1-201ENST00000629608 234 ntBASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 AL121761.2-201ENST00000598007 1648 ntBASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 FRMD8P1-201ENST00000440433 1524 ntBASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ARHGEF16Q5VV41 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 AC004461.1-201ENST00000412461 403 ntBASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 AL671277.1-201ENST00000429656 993 ntBASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 AC027612.4-201ENST00000605371 583 ntBASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 AC099522.2-201ENST00000607001 744 ntBASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ARHGEF16Q5VV41 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms