Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ALFQ53S48 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ALFQ53S48 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.55■□□□□ 0.4
ALFQ53S48 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ALFQ53S48 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ALFQ53S48 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ALFQ53S48 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.54■□□□□ 0.4
ALFQ53S48 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
ALFQ53S48 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.54■□□□□ 0.4
ALFQ53S48 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
ALFQ53S48 CRYGEP-201ENST00000412192 528 ntBASIC17.54■□□□□ 0.4
ALFQ53S48 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.54■□□□□ 0.4
ALFQ53S48 KRT18P2-201ENST00000447938 1258 ntBASIC17.54■□□□□ 0.4
ALFQ53S48 HCG4B-203ENST00000450128 991 ntBASIC17.54■□□□□ 0.4
ALFQ53S48 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.54■□□□□ 0.4
ALFQ53S48 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.54■□□□□ 0.4
ALFQ53S48 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.54■□□□□ 0.4
ALFQ53S48 DUX4L17-201ENST00000557360 1267 ntBASIC17.54■□□□□ 0.4
ALFQ53S48 AC064836.3-201ENST00000607928 673 ntBASIC17.54■□□□□ 0.4
ALFQ53S48 AC027601.4-201ENST00000611259 610 ntBASIC17.54■□□□□ 0.4
ALFQ53S48 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ALFQ53S48 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.54■□□□□ 0.4
ALFQ53S48 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ALFQ53S48 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.54■□□□□ 0.4
ALFQ53S48 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
ALFQ53S48 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ALFQ53S48 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
ALFQ53S48 AC060834.1-201ENST00000443027 2032 ntBASIC17.54■□□□□ 0.4
ALFQ53S48 AC092068.3-201ENST00000587894 2016 ntBASIC17.54■□□□□ 0.4
ALFQ53S48 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
ALFQ53S48 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.53■□□□□ 0.4
ALFQ53S48 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.53■□□□□ 0.4
ALFQ53S48 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
ALFQ53S48 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.53■□□□□ 0.4
ALFQ53S48 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ALFQ53S48 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.53■□□□□ 0.4
ALFQ53S48 MED15P5-201ENST00000423150 992 ntBASIC17.53■□□□□ 0.4
ALFQ53S48 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.53■□□□□ 0.4
ALFQ53S48 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.53■□□□□ 0.4
ALFQ53S48 KRT18P58-201ENST00000527480 1120 ntBASIC17.53■□□□□ 0.4
ALFQ53S48 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.53■□□□□ 0.4
ALFQ53S48 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.53■□□□□ 0.4
ALFQ53S48 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.53■□□□□ 0.4
ALFQ53S48 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.53■□□□□ 0.4
ALFQ53S48 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.53■□□□□ 0.4
ALFQ53S48 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.53■□□□□ 0.4
ALFQ53S48 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.53■□□□□ 0.4
ALFQ53S48 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
ALFQ53S48 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
ALFQ53S48 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
ALFQ53S48 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.52■□□□□ 0.4
ALFQ53S48 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
ALFQ53S48 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.52■□□□□ 0.4
ALFQ53S48 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 PMS2P1-201ENST00000431037 1228 ntBASIC17.52■□□□□ 0.4
ALFQ53S48 KRT18P3-201ENST00000451602 1288 ntBASIC17.52■□□□□ 0.4
ALFQ53S48 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.52■□□□□ 0.4
ALFQ53S48 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.52■□□□□ 0.4
ALFQ53S48 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.52■□□□□ 0.4
ALFQ53S48 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
ALFQ53S48 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
ALFQ53S48 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALFQ53S48 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
ALFQ53S48 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms