Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEP78395 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.27■□□□□ 0.35
PRAMEP78395 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.27■□□□□ 0.35
PRAMEP78395 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.27■□□□□ 0.35
PRAMEP78395 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
PRAMEP78395 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEP78395 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 AC097637.2-201ENST00000624096 1997 ntBASIC17.26■□□□□ 0.35
PRAMEP78395 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEP78395 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 NFIC-211ENST00000641145 8399 ntBASIC17.26■□□□□ 0.35
PRAMEP78395 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEP78395 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEP78395 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
PRAMEP78395 AP001269.4-201ENST00000609611 512 ntBASIC17.26■□□□□ 0.35
PRAMEP78395 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEP78395 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEP78395 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEP78395 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEP78395 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 GPR89P-201ENST00000407924 1495 ntBASIC17.25■□□□□ 0.35
PRAMEP78395 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRAMEP78395 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.25■□□□□ 0.35
PRAMEP78395 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
PRAMEP78395 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.25■□□□□ 0.35
PRAMEP78395 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.25■□□□□ 0.35
PRAMEP78395 ACTG1P4-201ENST00000425123 1122 ntBASIC17.25■□□□□ 0.35
PRAMEP78395 AC124947.2-201ENST00000547118 1133 ntBASIC17.25■□□□□ 0.35
PRAMEP78395 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.25■□□□□ 0.35
PRAMEP78395 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEP78395 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.25■□□□□ 0.35
PRAMEP78395 AC073592.4-201ENST00000623827 446 ntBASIC17.25■□□□□ 0.35
PRAMEP78395 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
PRAMEP78395 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEP78395 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEP78395 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEP78395 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEP78395 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEP78395 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEP78395 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEP78395 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PRAMEP78395 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRAMEP78395 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEP78395 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEP78395 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 KRT18P31-201ENST00000506277 1292 ntBASIC17.24■□□□□ 0.35
PRAMEP78395 AC106795.1-205ENST00000512851 1056 ntBASIC17.24■□□□□ 0.35
PRAMEP78395 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEP78395 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.24■□□□□ 0.35
PRAMEP78395 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEP78395 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEP78395 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEP78395 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEP78395 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms