Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC092850.2-201ENST00000623821 2697 ntBASIC15.02■□□□□ -0
SEC61A1P61619 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SEC61A1P61619 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SEC61A1P61619 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEC61A1P61619 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SEC61A1P61619 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEC61A1P61619 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEC61A1P61619 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.02■□□□□ -0
SEC61A1P61619 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.02■□□□□ -0
SEC61A1P61619 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.02■□□□□ -0
SEC61A1P61619 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEC61A1P61619 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.02■□□□□ -0
SEC61A1P61619 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.02■□□□□ -0
SEC61A1P61619 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.02■□□□□ -0
SEC61A1P61619 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.02■□□□□ -0
SEC61A1P61619 KRT17P6-201ENST00000453795 1220 ntBASIC15.02■□□□□ -0
SEC61A1P61619 UNC93B7-201ENST00000509439 705 ntBASIC15.02■□□□□ -0
SEC61A1P61619 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SEC61A1P61619 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.02■□□□□ -0
SEC61A1P61619 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SEC61A1P61619 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.02■□□□□ -0
SEC61A1P61619 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.02■□□□□ -0
SEC61A1P61619 AC099336.1-202ENST00000602961 463 ntBASIC15.02■□□□□ -0
SEC61A1P61619 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SEC61A1P61619 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
SEC61A1P61619 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.02□□□□□ -0.01
SEC61A1P61619 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 AC133963.1-201ENST00000504166 1679 ntBASIC15.02□□□□□ -0.01
SEC61A1P61619 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SEC61A1P61619 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SEC61A1P61619 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SEC61A1P61619 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SEC61A1P61619 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SEC61A1P61619 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SEC61A1P61619 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.01□□□□□ -0.01
SEC61A1P61619 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.01□□□□□ -0.01
SEC61A1P61619 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SEC61A1P61619 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 NUS1P1-201ENST00000446295 882 ntBASIC15.01□□□□□ -0.01
SEC61A1P61619 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.01□□□□□ -0.01
SEC61A1P61619 AC011840.4-201ENST00000578471 627 ntBASIC15.01□□□□□ -0.01
SEC61A1P61619 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.01□□□□□ -0.01
SEC61A1P61619 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.01□□□□□ -0.01
SEC61A1P61619 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.01□□□□□ -0.01
SEC61A1P61619 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.01□□□□□ -0.01
SEC61A1P61619 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.01□□□□□ -0.01
SEC61A1P61619 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SEC61A1P61619 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SEC61A1P61619 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SEC61A1P61619 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15□□□□□ -0.01
SEC61A1P61619 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SEC61A1P61619 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SEC61A1P61619 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15□□□□□ -0.01
SEC61A1P61619 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15□□□□□ -0.01
SEC61A1P61619 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15□□□□□ -0.01
SEC61A1P61619 AC022898.2-201ENST00000616822 1312 ntBASIC15□□□□□ -0.01
SEC61A1P61619 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SEC61A1P61619 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
SEC61A1P61619 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms