Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
AP3S2P59780 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
AP3S2P59780 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.72□□□□□ -0.05
AP3S2P59780 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.72□□□□□ -0.05
AP3S2P59780 AP003041.3-201ENST00000527151 707 ntBASIC14.72□□□□□ -0.05
AP3S2P59780 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.72□□□□□ -0.05
AP3S2P59780 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.72□□□□□ -0.05
AP3S2P59780 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.72□□□□□ -0.05
AP3S2P59780 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.72□□□□□ -0.05
AP3S2P59780 AC126177.1-201ENST00000547829 2218 ntBASIC14.72□□□□□ -0.05
AP3S2P59780 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AP3S2P59780 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.71□□□□□ -0.05
AP3S2P59780 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.71□□□□□ -0.05
AP3S2P59780 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
AP3S2P59780 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.71□□□□□ -0.05
AP3S2P59780 TSPY17P-201ENST00000450329 467 ntBASIC14.71□□□□□ -0.05
AP3S2P59780 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 RARRES2P6-201ENST00000567333 442 ntBASIC14.71□□□□□ -0.05
AP3S2P59780 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.71□□□□□ -0.05
AP3S2P59780 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.71□□□□□ -0.05
AP3S2P59780 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.71□□□□□ -0.05
AP3S2P59780 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 EGFEM1P-202ENST00000431685 1563 ntBASIC14.71□□□□□ -0.05
AP3S2P59780 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.71□□□□□ -0.05
AP3S2P59780 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
AP3S2P59780 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.71□□□□□ -0.05
AP3S2P59780 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
AP3S2P59780 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
AP3S2P59780 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.71□□□□□ -0.06
AP3S2P59780 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
AP3S2P59780 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.06
AP3S2P59780 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP3S2P59780 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
AP3S2P59780 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
AP3S2P59780 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.71□□□□□ -0.06
AP3S2P59780 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.71□□□□□ -0.06
AP3S2P59780 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
AP3S2P59780 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms