Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
VSX2P58304 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
VSX2P58304 SLC25A1P3-201ENST00000395415 828 ntBASIC16.36■□□□□ 0.21
VSX2P58304 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.36■□□□□ 0.21
VSX2P58304 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.36■□□□□ 0.21
VSX2P58304 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.36■□□□□ 0.21
VSX2P58304 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.36■□□□□ 0.21
VSX2P58304 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.36■□□□□ 0.21
VSX2P58304 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
VSX2P58304 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.36■□□□□ 0.21
VSX2P58304 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
VSX2P58304 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
VSX2P58304 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 EGFEM1P-202ENST00000431685 1563 ntBASIC16.35■□□□□ 0.21
VSX2P58304 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
VSX2P58304 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.35■□□□□ 0.21
VSX2P58304 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.35■□□□□ 0.21
VSX2P58304 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.35■□□□□ 0.21
VSX2P58304 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.35■□□□□ 0.21
VSX2P58304 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.35■□□□□ 0.21
VSX2P58304 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.35■□□□□ 0.21
VSX2P58304 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.35■□□□□ 0.21
VSX2P58304 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.35■□□□□ 0.21
VSX2P58304 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VSX2P58304 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VSX2P58304 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VSX2P58304 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.34■□□□□ 0.21
VSX2P58304 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VSX2P58304 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VSX2P58304 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.34■□□□□ 0.21
VSX2P58304 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
VSX2P58304 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.34■□□□□ 0.21
VSX2P58304 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.34■□□□□ 0.21
VSX2P58304 PRSS29P-201ENST00000440800 595 ntBASIC16.34■□□□□ 0.21
VSX2P58304 VN2R19P-201ENST00000442399 1052 ntBASIC16.34■□□□□ 0.21
VSX2P58304 AL591424.1-201ENST00000442569 1213 ntBASIC16.34■□□□□ 0.21
VSX2P58304 KRT18P3-201ENST00000451602 1288 ntBASIC16.34■□□□□ 0.21
VSX2P58304 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.34■□□□□ 0.21
VSX2P58304 FAM197Y3-203ENST00000618346 717 ntBASIC16.34■□□□□ 0.21
VSX2P58304 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.34■□□□□ 0.21
VSX2P58304 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.34■□□□□ 0.21
VSX2P58304 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.34■□□□□ 0.21
VSX2P58304 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.34■□□□□ 0.21
VSX2P58304 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VSX2P58304 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.33■□□□□ 0.21
VSX2P58304 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
VSX2P58304 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
VSX2P58304 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VSX2P58304 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
VSX2P58304 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
VSX2P58304 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
VSX2P58304 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VSX2P58304 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.33■□□□□ 0.2
VSX2P58304 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VSX2P58304 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.33■□□□□ 0.2
VSX2P58304 RNA5SP416-201ENST00000516838 111 ntBASIC16.33■□□□□ 0.2
VSX2P58304 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.33■□□□□ 0.2
VSX2P58304 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.33■□□□□ 0.2
VSX2P58304 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.33■□□□□ 0.2
VSX2P58304 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.33■□□□□ 0.2
VSX2P58304 AC064836.3-201ENST00000607928 673 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms