Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 AL118558.3-201ENST00000607414 1079 ntBASIC14.17□□□□□ -0.14
RIPPLY3P57055 MIR6080-201ENST00000617359 66 ntBASIC14.17□□□□□ -0.14
RIPPLY3P57055 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIPPLY3P57055 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RIPPLY3P57055 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 BRWD1P1-201ENST00000401091 371 ntBASIC14.16□□□□□ -0.14
RIPPLY3P57055 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 MIR663B-201ENST00000408361 115 ntBASIC14.16□□□□□ -0.14
RIPPLY3P57055 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.16□□□□□ -0.14
RIPPLY3P57055 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 CXCL1P1-201ENST00000502804 216 ntBASIC14.16□□□□□ -0.14
RIPPLY3P57055 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 API5-211ENST00000534695 560 ntTSL 5 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.16□□□□□ -0.14
RIPPLY3P57055 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIPPLY3P57055 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.15□□□□□ -0.14
RIPPLY3P57055 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIPPLY3P57055 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RIPPLY3P57055 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms