Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN15P56746 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN15P56746 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CLDN15P56746 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN15P56746 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN15P56746 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN15P56746 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN15P56746 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CLDN15P56746 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN15P56746 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN15P56746 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CLDN15P56746 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CLDN15P56746 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CLDN15P56746 AC023274.1-201ENST00000418278 595 ntBASIC15.32■□□□□ 0.04
CLDN15P56746 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN15P56746 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN15P56746 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN15P56746 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN15P56746 AC092865.6-201ENST00000642101 219 ntBASIC15.32■□□□□ 0.04
CLDN15P56746 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
CLDN15P56746 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 AC002310.6-201ENST00000624451 1377 ntBASIC15.32■□□□□ 0.04
CLDN15P56746 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN15P56746 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN15P56746 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN15P56746 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN15P56746 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CLDN15P56746 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.31■□□□□ 0.04
CLDN15P56746 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CLDN15P56746 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN15P56746 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN15P56746 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN15P56746 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN15P56746 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLDN15P56746 RHOQP3-201ENST00000437982 621 ntBASIC15.31■□□□□ 0.04
CLDN15P56746 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN15P56746 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.31■□□□□ 0.04
CLDN15P56746 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.31■□□□□ 0.04
CLDN15P56746 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN15P56746 AC010507.1-201ENST00000633895 436 ntBASIC15.31■□□□□ 0.04
CLDN15P56746 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 AL023806.1-201ENST00000603994 1649 ntBASIC15.31■□□□□ 0.04
CLDN15P56746 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN15P56746 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 AL645608.8-201ENST00000606034 2086 ntBASIC15.31■□□□□ 0.04
CLDN15P56746 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLDN15P56746 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN15P56746 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN15P56746 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLDN15P56746 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN15P56746 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN15P56746 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN15P56746 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN15P56746 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN15P56746 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN15P56746 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN15P56746 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms