Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.74■□□□□ 0.27
CDH13P55290 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 IER3-202ENST00000376377 1350 ntBASIC16.74■□□□□ 0.27
CDH13P55290 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 AC008741.2-201ENST00000612792 3115 ntBASIC16.74■□□□□ 0.27
CDH13P55290 AC008894.3-201ENST00000624324 3103 ntBASIC16.74■□□□□ 0.27
CDH13P55290 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDH13P55290 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.74■□□□□ 0.27
CDH13P55290 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH13P55290 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH13P55290 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH13P55290 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH13P55290 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH13P55290 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH13P55290 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.73■□□□□ 0.27
CDH13P55290 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.73■□□□□ 0.27
CDH13P55290 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CDH13P55290 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.73■□□□□ 0.27
CDH13P55290 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.73■□□□□ 0.27
CDH13P55290 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.73■□□□□ 0.27
CDH13P55290 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDH13P55290 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDH13P55290 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDH13P55290 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
CDH13P55290 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH13P55290 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.72■□□□□ 0.27
CDH13P55290 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 AC074051.2-201ENST00000565115 352 ntBASIC16.72■□□□□ 0.27
CDH13P55290 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.72■□□□□ 0.27
CDH13P55290 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CDH13P55290 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDH13P55290 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.72■□□□□ 0.27
CDH13P55290 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CDH13P55290 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 DOC2GP-204ENST00000639052 2548 ntBASIC16.71■□□□□ 0.27
CDH13P55290 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.71■□□□□ 0.27
CDH13P55290 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CDH13P55290 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDH13P55290 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms