Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH11P55287 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH11P55287 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH11P55287 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.7■□□□□ 0.1
CDH11P55287 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.7■□□□□ 0.1
CDH11P55287 AC002558.1-201ENST00000488906 803 ntBASIC15.7■□□□□ 0.1
CDH11P55287 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH11P55287 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.7■□□□□ 0.1
CDH11P55287 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH11P55287 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH11P55287 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 AL732292.2-201ENST00000609649 430 ntBASIC15.7■□□□□ 0.1
CDH11P55287 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.7■□□□□ 0.1
CDH11P55287 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.7■□□□□ 0.1
CDH11P55287 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CDH11P55287 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CDH11P55287 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CDH11P55287 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CDH11P55287 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.7■□□□□ 0.1
CDH11P55287 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH11P55287 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH11P55287 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH11P55287 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH11P55287 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH11P55287 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH11P55287 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH11P55287 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH11P55287 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH11P55287 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CDH11P55287 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CDH11P55287 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH11P55287 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 SLC25A1P3-201ENST00000395415 828 ntBASIC15.69■□□□□ 0.1
CDH11P55287 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.69■□□□□ 0.1
CDH11P55287 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.69■□□□□ 0.1
CDH11P55287 AC091304.2-201ENST00000564639 760 ntBASIC15.69■□□□□ 0.1
CDH11P55287 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH11P55287 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.69■□□□□ 0.1
CDH11P55287 AC099336.1-202ENST00000602961 463 ntBASIC15.69■□□□□ 0.1
CDH11P55287 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.69■□□□□ 0.1
CDH11P55287 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.69■□□□□ 0.1
CDH11P55287 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CDH11P55287 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.69■□□□□ 0.1
CDH11P55287 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.69■□□□□ 0.1
CDH11P55287 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CDH11P55287 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CDH11P55287 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.68■□□□□ 0.1
CDH11P55287 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 AL845331.1-201ENST00000424978 1190 ntBASIC15.68■□□□□ 0.1
CDH11P55287 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 KRT17P6-201ENST00000453795 1220 ntBASIC15.68■□□□□ 0.1
CDH11P55287 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CDH11P55287 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.68■□□□□ 0.1
CDH11P55287 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.68■□□□□ 0.1
CDH11P55287 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.68■□□□□ 0.1
CDH11P55287 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms