Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRPF1P55201 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
BRPF1P55201 AC078925.2-201ENST00000624013 1973 ntBASIC21.72■■□□□ 1.07
BRPF1P55201 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRPF1P55201 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BRPF1P55201 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC21.71■■□□□ 1.07
BRPF1P55201 LTB4R2-202ENST00000528054 3092 ntBASIC21.71■■□□□ 1.07
BRPF1P55201 AL645728.1-201ENST00000366221 2101 ntBASIC21.71■■□□□ 1.07
BRPF1P55201 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
BRPF1P55201 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
BRPF1P55201 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
BRPF1P55201 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.71■■□□□ 1.07
BRPF1P55201 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC21.71■■□□□ 1.07
BRPF1P55201 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
BRPF1P55201 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC21.71■■□□□ 1.07
BRPF1P55201 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 MIR4492-201ENST00000581627 80 ntBASIC21.71■■□□□ 1.07
BRPF1P55201 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC21.71■■□□□ 1.07
BRPF1P55201 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
BRPF1P55201 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.71■■□□□ 1.07
BRPF1P55201 AC134684.3-201ENST00000641758 218 ntBASIC21.71■■□□□ 1.07
BRPF1P55201 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.71■■□□□ 1.07
BRPF1P55201 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
BRPF1P55201 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
BRPF1P55201 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.7■■□□□ 1.07
BRPF1P55201 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
BRPF1P55201 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
BRPF1P55201 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.7■■□□□ 1.06
BRPF1P55201 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
BRPF1P55201 PRSS29P-201ENST00000440800 595 ntBASIC21.7■■□□□ 1.06
BRPF1P55201 AP002490.2-201ENST00000524791 560 ntBASIC21.7■■□□□ 1.06
BRPF1P55201 AC005593.1-201ENST00000624894 515 ntBASIC21.7■■□□□ 1.06
BRPF1P55201 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC21.7■■□□□ 1.06
BRPF1P55201 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.7■■□□□ 1.06
BRPF1P55201 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.7■■□□□ 1.06
BRPF1P55201 AC106886.4-201ENST00000623557 2502 ntBASIC21.7■■□□□ 1.06
BRPF1P55201 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
BRPF1P55201 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC21.69■■□□□ 1.06
BRPF1P55201 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
BRPF1P55201 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC21.69■■□□□ 1.06
BRPF1P55201 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.69■■□□□ 1.06
BRPF1P55201 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
BRPF1P55201 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
BRPF1P55201 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC21.69■■□□□ 1.06
BRPF1P55201 AC244107.1-201ENST00000442033 332 ntBASIC21.69■■□□□ 1.06
BRPF1P55201 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
BRPF1P55201 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
BRPF1P55201 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.69■■□□□ 1.06
BRPF1P55201 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.69■■□□□ 1.06
BRPF1P55201 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.69■■□□□ 1.06
BRPF1P55201 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
BRPF1P55201 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 PCDHA12-202ENST00000613593 2588 ntBASIC21.69■■□□□ 1.06
BRPF1P55201 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.69■■□□□ 1.06
BRPF1P55201 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
BRPF1P55201 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
BRPF1P55201 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC21.69■■□□□ 1.06
BRPF1P55201 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
BRPF1P55201 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
BRPF1P55201 LBH-204ENST00000406087 559 ntTSL 4 BASIC21.68■■□□□ 1.06
BRPF1P55201 AC108073.2-201ENST00000464002 357 ntBASIC21.68■■□□□ 1.06
BRPF1P55201 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.68■■□□□ 1.06
BRPF1P55201 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.68■■□□□ 1.06
BRPF1P55201 AL139011.1-202ENST00000642063 584 ntBASIC21.68■■□□□ 1.06
BRPF1P55201 AC129492.6-201ENST00000611383 1305 ntBASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms