Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.93■□□□□ 0.14
PSMD4P55036 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.93■□□□□ 0.14
PSMD4P55036 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.93■□□□□ 0.14
PSMD4P55036 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.93■□□□□ 0.14
PSMD4P55036 AF238378.1-201ENST00000526806 358 ntBASIC15.93■□□□□ 0.14
PSMD4P55036 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 AC139887.3-201ENST00000568585 713 ntBASIC15.93■□□□□ 0.14
PSMD4P55036 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PSMD4P55036 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.93■□□□□ 0.14
PSMD4P55036 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
PSMD4P55036 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PSMD4P55036 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
PSMD4P55036 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.93■□□□□ 0.14
PSMD4P55036 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PSMD4P55036 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.92■□□□□ 0.14
PSMD4P55036 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 LINC00982-205ENST00000420957 435 ntBASIC15.92■□□□□ 0.14
PSMD4P55036 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.92■□□□□ 0.14
PSMD4P55036 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.92■□□□□ 0.14
PSMD4P55036 MTDHP4-201ENST00000600287 670 ntBASIC15.92■□□□□ 0.14
PSMD4P55036 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 AL121912.1-201ENST00000603683 238 ntBASIC15.92■□□□□ 0.14
PSMD4P55036 AC064862.7-201ENST00000604520 867 ntBASIC15.92■□□□□ 0.14
PSMD4P55036 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.92■□□□□ 0.14
PSMD4P55036 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.92■□□□□ 0.14
PSMD4P55036 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PSMD4P55036 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.92■□□□□ 0.14
PSMD4P55036 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PSMD4P55036 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
PSMD4P55036 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PSMD4P55036 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 GPR89P-201ENST00000407924 1495 ntBASIC15.91■□□□□ 0.14
PSMD4P55036 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.91■□□□□ 0.14
PSMD4P55036 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PSMD4P55036 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PSMD4P55036 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 RPS2P28-201ENST00000314255 741 ntBASIC15.91■□□□□ 0.14
PSMD4P55036 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PSMD4P55036 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms