Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
AIF1P55008 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.58■□□□□ 0.4
AIF1P55008 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
AIF1P55008 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AIF1P55008 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AIF1P55008 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AIF1P55008 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
AIF1P55008 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AIF1P55008 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.58■□□□□ 0.4
AIF1P55008 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.58■□□□□ 0.4
AIF1P55008 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AIF1P55008 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AIF1P55008 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
AIF1P55008 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AIF1P55008 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
AIF1P55008 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.57■□□□□ 0.4
AIF1P55008 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
AIF1P55008 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.57■□□□□ 0.4
AIF1P55008 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.57■□□□□ 0.4
AIF1P55008 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.57■□□□□ 0.4
AIF1P55008 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
AIF1P55008 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
AIF1P55008 AC098831.1-202ENST00000438821 336 ntBASIC17.57■□□□□ 0.4
AIF1P55008 AC108073.2-201ENST00000464002 357 ntBASIC17.57■□□□□ 0.4
AIF1P55008 IGHV3-22-201ENST00000520721 359 ntBASIC17.57■□□□□ 0.4
AIF1P55008 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.57■□□□□ 0.4
AIF1P55008 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
AIF1P55008 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
AIF1P55008 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.57■□□□□ 0.4
AIF1P55008 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.57■□□□□ 0.4
AIF1P55008 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.57■□□□□ 0.4
AIF1P55008 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
AIF1P55008 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.57■□□□□ 0.4
AIF1P55008 AL139011.1-202ENST00000642063 584 ntBASIC17.57■□□□□ 0.4
AIF1P55008 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AIF1P55008 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.57■□□□□ 0.4
AIF1P55008 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.57■□□□□ 0.4
AIF1P55008 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.56■□□□□ 0.4
AIF1P55008 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 FDX1P1-201ENST00000449115 551 ntBASIC17.56■□□□□ 0.4
AIF1P55008 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.56■□□□□ 0.4
AIF1P55008 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.56■□□□□ 0.4
AIF1P55008 AC005412.3-201ENST00000580309 715 ntBASIC17.56■□□□□ 0.4
AIF1P55008 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
AIF1P55008 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.56■□□□□ 0.4
AIF1P55008 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AIF1P55008 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
AIF1P55008 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.56■□□□□ 0.4
AIF1P55008 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
AIF1P55008 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.56■□□□□ 0.4
AIF1P55008 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AIF1P55008 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.55■□□□□ 0.4
AIF1P55008 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AIF1P55008 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AIF1P55008 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
AIF1P55008 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AIF1P55008 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AIF1P55008 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AIF1P55008 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AIF1P55008 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.55■□□□□ 0.4
AIF1P55008 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.55■□□□□ 0.4
AIF1P55008 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
AIF1P55008 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AIF1P55008 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms