Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.88□□□□□ -0.03
ATP1B3P54709 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.88□□□□□ -0.03
ATP1B3P54709 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ATP1B3P54709 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 AC060834.1-201ENST00000443027 2032 ntBASIC14.87□□□□□ -0.03
ATP1B3P54709 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 KRT8P10-201ENST00000450021 1447 ntBASIC14.87□□□□□ -0.03
ATP1B3P54709 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 AL845331.1-201ENST00000424978 1190 ntBASIC14.87□□□□□ -0.03
ATP1B3P54709 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
ATP1B3P54709 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.87□□□□□ -0.03
ATP1B3P54709 STK19B-204ENST00000512515 211 ntBASIC14.87□□□□□ -0.03
ATP1B3P54709 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.87□□□□□ -0.03
ATP1B3P54709 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 STK25P1-201ENST00000585406 838 ntBASIC14.87□□□□□ -0.03
ATP1B3P54709 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
ATP1B3P54709 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.87□□□□□ -0.03
ATP1B3P54709 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
ATP1B3P54709 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
ATP1B3P54709 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
ATP1B3P54709 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 LINC00554-201ENST00000564841 3011 ntBASIC14.87□□□□□ -0.03
ATP1B3P54709 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ATP1B3P54709 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.86□□□□□ -0.03
ATP1B3P54709 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 AL513477.1-201ENST00000602865 2407 ntBASIC14.86□□□□□ -0.03
ATP1B3P54709 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP1B3P54709 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
ATP1B3P54709 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP1B3P54709 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.86□□□□□ -0.03
ATP1B3P54709 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.86□□□□□ -0.03
ATP1B3P54709 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 AL031133.1-201ENST00000406807 723 ntBASIC14.86□□□□□ -0.03
ATP1B3P54709 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
ATP1B3P54709 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP1B3P54709 AL049597.2-201ENST00000565575 961 ntBASIC14.86□□□□□ -0.03
ATP1B3P54709 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.86□□□□□ -0.03
ATP1B3P54709 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC14.86□□□□□ -0.03
ATP1B3P54709 NTF6B-201ENST00000591913 560 ntBASIC14.86□□□□□ -0.03
ATP1B3P54709 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.86□□□□□ -0.03
ATP1B3P54709 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ATP1B3P54709 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.86□□□□□ -0.03
ATP1B3P54709 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ATP1B3P54709 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
ATP1B3P54709 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ATP1B3P54709 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
ATP1B3P54709 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.85□□□□□ -0.03
ATP1B3P54709 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ATP1B3P54709 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms