Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC003669.1-201ENST00000334569 611 ntBASIC17.65■□□□□ 0.42
NEK3P51956 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NEK3P51956 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.65■□□□□ 0.42
NEK3P51956 KLF4P1-201ENST00000412782 1185 ntBASIC17.65■□□□□ 0.42
NEK3P51956 AL020989.1-201ENST00000422979 469 ntBASIC17.65■□□□□ 0.42
NEK3P51956 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.65■□□□□ 0.42
NEK3P51956 IGHV3-52-201ENST00000519770 353 ntBASIC17.65■□□□□ 0.42
NEK3P51956 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.65■□□□□ 0.42
NEK3P51956 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.65■□□□□ 0.42
NEK3P51956 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NEK3P51956 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.65■□□□□ 0.42
NEK3P51956 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.65■□□□□ 0.42
NEK3P51956 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.65■□□□□ 0.42
NEK3P51956 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NEK3P51956 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NEK3P51956 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NEK3P51956 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.65■□□□□ 0.42
NEK3P51956 AL162727.3-201ENST00000635661 2787 ntBASIC17.65■□□□□ 0.42
NEK3P51956 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.65■□□□□ 0.42
NEK3P51956 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.65■□□□□ 0.42
NEK3P51956 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NEK3P51956 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
NEK3P51956 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NEK3P51956 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NEK3P51956 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NEK3P51956 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.64■□□□□ 0.42
NEK3P51956 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NEK3P51956 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEK3P51956 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEK3P51956 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.64■□□□□ 0.41
NEK3P51956 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.64■□□□□ 0.41
NEK3P51956 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEK3P51956 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NEK3P51956 AC132938.5-201ENST00000624980 1813 ntBASIC17.64■□□□□ 0.41
NEK3P51956 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEK3P51956 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.64■□□□□ 0.41
NEK3P51956 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.64■□□□□ 0.41
NEK3P51956 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.64■□□□□ 0.41
NEK3P51956 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.64■□□□□ 0.41
NEK3P51956 AC107918.4-202ENST00000641623 219 ntBASIC17.64■□□□□ 0.41
NEK3P51956 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEK3P51956 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NEK3P51956 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NEK3P51956 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
NEK3P51956 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.64■□□□□ 0.41
NEK3P51956 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NEK3P51956 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NEK3P51956 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
NEK3P51956 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.63■□□□□ 0.41
NEK3P51956 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.63■□□□□ 0.41
NEK3P51956 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NEK3P51956 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NEK3P51956 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NEK3P51956 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.63■□□□□ 0.41
NEK3P51956 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NEK3P51956 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.63■□□□□ 0.41
NEK3P51956 LAGE3P1-201ENST00000425356 484 ntBASIC17.63■□□□□ 0.41
NEK3P51956 PRYP5-201ENST00000451909 266 ntBASIC17.63■□□□□ 0.41
NEK3P51956 AC002558.1-201ENST00000488906 803 ntBASIC17.63■□□□□ 0.41
NEK3P51956 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.63■□□□□ 0.41
NEK3P51956 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.63■□□□□ 0.41
NEK3P51956 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NEK3P51956 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.63■□□□□ 0.41
NEK3P51956 LYSMD4-203ENST00000378904 2122 ntBASIC17.63■□□□□ 0.41
NEK3P51956 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 PCDHA14-201ENST00000506751 2298 ntBASIC17.63■□□□□ 0.41
NEK3P51956 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NEK3P51956 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.63■□□□□ 0.41
NEK3P51956 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NEK3P51956 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NEK3P51956 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NEK3P51956 AC116353.5-201ENST00000638148 1699 ntBASIC17.62■□□□□ 0.41
NEK3P51956 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.62■□□□□ 0.41
NEK3P51956 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms